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basic / basicCancer Epigenomics

Bing Ren

任冰

PhD

🏢University of California San Diego, Ludwig Cancer Research(加州大学圣地亚哥分校路德维希癌症研究所)🌐USA

Professor, Department of Cellular and Molecular Medicine; Ludwig Cancer Research Member细胞与分子医学系教授;路德维希癌症研究所成员

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h-index
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Key Papers
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Awards
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Key Contributions

👥Biography 个人简介

Bing Ren is a leading authority on chromatin organization and gene regulation, credited with co-developing ChIP-on-chip and contributing pivotal methodology for mapping regulatory elements. His single-cell ATAC-seq and Hi-C studies have transformed understanding of cancer regulatory landscapes and 3D genome topology.

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🧪Research Fields 研究领域

Single-Cell Chromatin Accessibility单细胞染色质可及性
ATAC-seqATAC-seq
Cancer Regulatory Elements癌症调控元件
3D Genome Organization三维基因组组织
Enhancer Biology增强子生物学

🎓Key Contributions 主要贡献

Single-Cell Chromatin Accessibility in Cancer

Pioneered single-cell ATAC-seq applications to dissect intratumor epigenetic heterogeneity, revealing rare cancer cell subpopulations with distinct regulatory programs driving resistance.

3D Genome Topology in Oncogenesis

Mapped topologically associating domains (TADs) and chromatin loops in cancer cells, demonstrating how structural variants disrupt insulator boundaries to activate oncogenes.

ENCODE Consortium Leadership

Led major contributions to the ENCODE project mapping regulatory elements genome-wide across human cell types, providing the foundational resource for interpreting cancer non-coding mutations.

Representative Works 代表性著作

[1]

A comparison of the functional and topological properties of enhancers and CTCF-binding sites in the human genome

Nature Genetics (2021)

Distinguished enhancer and insulator regulatory classes at single-cell resolution across human tissues and cancer types.

[2]

Single-cell multiomic analysis identifies regulatory programs in mixed-phenotype acute leukemia

Nature Biotechnology (2020)

Applied simultaneous scRNA-seq and scATAC-seq to map gene regulatory networks driving lineage ambiguity in acute leukemia.

[3]

Chromatin interaction analysis reveals changes in small chromosome and telomere clustering between epithelial and breast cancer cells

Genome Biology (2013)

Revealed 3D chromatin reorganization events linking topological changes to gene expression alterations in cancer.

🏆Awards & Recognition 奖项与荣誉

🏆HHMI Investigator
🏆NIH ENCODE Project Principal Investigator
🏆American Academy of Arts and Sciences Fellow
🏆Elected Member, National Academy of Sciences

📄Data Sources 数据来源

Last updated: 2026-01-15 | All information from publicly available academic sources

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