Sohrab Shah
索拉布·沙阿
PhD
Chair, Computational Oncology; Professor, Physiology, Biophysics and Systems Biology计算肿瘤学主任;生理学、生物物理学与系统生物学教授
👥Biography 个人简介
Sohrab Shah PhD is Chair of Computational Oncology and Professor at Memorial Sloan Kettering Cancer Center, and previously led the Shah Laboratory at BC Cancer and University of British Columbia. He is a world leader in applying single-cell sequencing and advanced computational methods to dissect the cellular and molecular complexity of cancer. His laboratory developed SIGNALS, MEDICC2, and other widely used algorithms for inferring copy number evolution from single-cell sequencing data, and produced landmark studies revealing the evolutionary dynamics of breast cancer, ovarian cancer, and lymphoma at single-cell resolution. Shah's group was among the first to apply single-cell DNA sequencing at scale to trace the clonal architecture of tumours, demonstrating that cancer evolution follows punctuated rather than gradual modes in many settings. His work integrating single-cell transcriptomics, spatial transcriptomics, and genomics has revealed how the tumour microenvironment interacts with evolving cancer clones to shape immunosuppression and drug resistance. He developed computational methods for deconvolving tumour composition from bulk RNA-seq data and for integrating multi-modal single-cell data, contributing critical tools adopted widely in the cancer genomics community. Shah has received numerous honours including the Canadian Institutes of Health Research Foundation Award and election to the Royal Society of Canada.
🧪Research Fields 研究领域
🎓Key Contributions 主要贡献
Single-Cell Copy Number Evolution in Cancer
Developed computational algorithms (e.g., SIGNALS, HMMcopy) for inferring copy number evolution from single-cell sequencing data and produced landmark studies of clonal evolution in breast and ovarian cancer, revealing that genomic diversity is established early and evolves through punctuated bursts.
Spatial Transcriptomics of the Tumour Microenvironment
Applied spatial transcriptomics (10x Visium, MERFISH) to map the spatial organisation of cancer cells and immune and stromal populations within tumours, demonstrating how local microenvironmental niches shape immune exclusion, drug resistance, and metastatic seeding.
Clonal Dynamics of High-Grade Serous Ovarian Cancer
Performed comprehensive single-cell and multi-region sequencing of ovarian cancer, demonstrating that high-grade serous ovarian cancer is characterised by parallel evolution and convergent genomic alterations, explaining therapeutic resistance and recurrence patterns.
AI Methods for Cancer Genomics
Developed machine learning and deep learning methods for integrating multi-modal genomic data, inferring tumour phylogenies, and predicting clinical outcomes from single-cell and bulk sequencing data, advancing the field of computational cancer genomics.
Representative Works 代表性著作
Dynamics of genomic clones in breast cancer patient xenografts at single-cell resolution
Nature (2015)
Single-cell genome sequencing of patient-derived xenografts revealing that clonal dynamics during tumour growth are dominated by selection of pre-existing clones rather than de novo mutation, with implications for therapy resistance.
High-grade serous ovarian carcinoma organoids for disease modelling and drug sensitivity testing
Nature Medicine (2020)
Integration of single-cell sequencing with organoid drug testing to characterise ovarian cancer clonal evolution and predict therapeutic vulnerabilities at single-cell resolution.
Spatial genomics enables multi-modal study of clonal heterogeneity in tissues
Nature (2021)
Methodological and application paper demonstrating the power of spatially resolved genomics to map clonal architecture and microenvironmental interactions simultaneously in solid tumours.
🏆Awards & Recognition 奖项与荣誉
📄Data Sources 数据来源
Last updated: 2026-01-15 | All information from publicly available academic sources
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