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Translational Medicine / 转化医学molecular pathology

Sohrab Shah

索拉布·沙阿

PhD

🏢Memorial Sloan Kettering Cancer Center(纪念斯隆-凯特琳癌症中心)🌐Canada

Chair, Computational Oncology; Professor, Physiology, Biophysics and Systems Biology计算肿瘤学主任;生理学、生物物理学与系统生物学教授

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Key Papers
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Awards
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Key Contributions

👥Biography 个人简介

Sohrab Shah PhD is Chair of Computational Oncology and Professor at Memorial Sloan Kettering Cancer Center, and previously led the Shah Laboratory at BC Cancer and University of British Columbia. He is a world leader in applying single-cell sequencing and advanced computational methods to dissect the cellular and molecular complexity of cancer. His laboratory developed SIGNALS, MEDICC2, and other widely used algorithms for inferring copy number evolution from single-cell sequencing data, and produced landmark studies revealing the evolutionary dynamics of breast cancer, ovarian cancer, and lymphoma at single-cell resolution. Shah's group was among the first to apply single-cell DNA sequencing at scale to trace the clonal architecture of tumours, demonstrating that cancer evolution follows punctuated rather than gradual modes in many settings. His work integrating single-cell transcriptomics, spatial transcriptomics, and genomics has revealed how the tumour microenvironment interacts with evolving cancer clones to shape immunosuppression and drug resistance. He developed computational methods for deconvolving tumour composition from bulk RNA-seq data and for integrating multi-modal single-cell data, contributing critical tools adopted widely in the cancer genomics community. Shah has received numerous honours including the Canadian Institutes of Health Research Foundation Award and election to the Royal Society of Canada.

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🧪Research Fields 研究领域

Single-Cell Sequencing in Cancer癌症单细胞测序
Spatial Transcriptomics空间转录组学
Clonal Dynamics克隆动力学
Breast and Ovarian Cancer Genomics乳腺癌与卵巢癌基因组学
AI for Cancer Genomics癌症基因组学人工智能

🎓Key Contributions 主要贡献

Single-Cell Copy Number Evolution in Cancer

Developed computational algorithms (e.g., SIGNALS, HMMcopy) for inferring copy number evolution from single-cell sequencing data and produced landmark studies of clonal evolution in breast and ovarian cancer, revealing that genomic diversity is established early and evolves through punctuated bursts.

Spatial Transcriptomics of the Tumour Microenvironment

Applied spatial transcriptomics (10x Visium, MERFISH) to map the spatial organisation of cancer cells and immune and stromal populations within tumours, demonstrating how local microenvironmental niches shape immune exclusion, drug resistance, and metastatic seeding.

Clonal Dynamics of High-Grade Serous Ovarian Cancer

Performed comprehensive single-cell and multi-region sequencing of ovarian cancer, demonstrating that high-grade serous ovarian cancer is characterised by parallel evolution and convergent genomic alterations, explaining therapeutic resistance and recurrence patterns.

AI Methods for Cancer Genomics

Developed machine learning and deep learning methods for integrating multi-modal genomic data, inferring tumour phylogenies, and predicting clinical outcomes from single-cell and bulk sequencing data, advancing the field of computational cancer genomics.

Representative Works 代表性著作

[1]

Dynamics of genomic clones in breast cancer patient xenografts at single-cell resolution

Nature (2015)

Single-cell genome sequencing of patient-derived xenografts revealing that clonal dynamics during tumour growth are dominated by selection of pre-existing clones rather than de novo mutation, with implications for therapy resistance.

[2]

High-grade serous ovarian carcinoma organoids for disease modelling and drug sensitivity testing

Nature Medicine (2020)

Integration of single-cell sequencing with organoid drug testing to characterise ovarian cancer clonal evolution and predict therapeutic vulnerabilities at single-cell resolution.

[3]

Spatial genomics enables multi-modal study of clonal heterogeneity in tissues

Nature (2021)

Methodological and application paper demonstrating the power of spatially resolved genomics to map clonal architecture and microenvironmental interactions simultaneously in solid tumours.

🏆Awards & Recognition 奖项与荣誉

🏆CIHR Foundation Grant
🏆Michael Smith Foundation for Health Research Scholar
🏆Terry Fox New Frontiers Programme Grant
🏆Elected Fellow, Royal Society of Canada

📄Data Sources 数据来源

Last updated: 2026-01-15 | All information from publicly available academic sources

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